StochKit2: software for discrete stochastic simulation of biochemical systems with events KR Sanft, S Wu, M Roh, J Fu, RK Lim, LR Petzold Bioinformatics 27 (17), 2457-2458, 2011 | 179 | 2011 |
Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist B Drawert, A Hellander, B Bales, D Banerjee, G Bellesia, BJ Daigle Jr, ... PLOS Computational Biology 12 (12), e1005220, 2016 | 78 | 2016 |
Michaelis–Menten speeds up tau-leaping under a wide range of conditions S Wu, J Fu, Y Cao, L Petzold The Journal of chemical physics 134 (13), 134112, 2011 | 16 | 2011 |
The time dependent propensity function for acceleration of spatial stochastic simulation of reaction–diffusion systems J Fu, S Wu, H Li, LR Petzold Journal of Computational Physics 274, 524-549, 2014 | 15 | 2014 |
Automatic identification of model reductions for discrete stochastic simulation S Wu, J Fu, H Li, L Petzold The Journal of Chemical Physics 137 (3), 2012 | 13 | 2012 |
Estimating collection size with logistic regression J Xu, S Wu, X Li Proceedings of the 30th annual international ACM SIGIR conference on …, 2007 | 13 | 2007 |
Time dependent solution for acceleration of tau-leaping J Fu, S Wu, LR Petzold Journal of Computational Physics 235, 446-457, 2013 | 10 | 2013 |
Computational model for hyperfibrinolytic onset of acute traumatic coagulopathy TB Wu, S Wu, M Buoni, T Orfeo, K Brummel-Ziedins, M Cohen, L Petzold Annals of biomedical engineering 46, 1173-1182, 2018 | 9 | 2018 |
Adaptive deployment of model reductions for tau-leaping simulation S Wu, J Fu, P Linda R. The Journal of Chemical Physics 142, 204108, 2015 | 7 | 2015 |
Automatic Model Reductions for Stochastic Simulation S Wu University of California, Santa Barbara, 2014 | | 2014 |
StochKit2: Efficient and extensible software for stochastic simulation of biochemical systems KR Sanft, S Wu, H Li, J Fu, M Roh, LR Petzold | | |